Merge branch 'main' into run_shell_cmd-fix

Author: maddenp-cu

.github/scripts/test.sh

@@ -11,7 +11,7 @@ run_tests() {
   set -x
   git clean -dfx
   pip install --editable src # sets new Python version in entry-point scripts
-  make test && make test-nb
+  make test && make notebooks && make test-nb
   status=$?
   set +x
   conda deactivate

notebooks/config.ipynb

@@ -9,7 +9,6 @@
     "\n",
     "The `uwtools` API's `config` module provides functions to create and manipulate configuration files, objects, and dictionaries.\n",
     "\n",
-    "<div class=\"alert alert-warning\"><b>Note: </b>This notebook was tested using <code>uwtools</code> version 2.6.0.</div>\n",
     "<div class=\"alert alert-info\">For more information, please see the <a href=\"https://uwtools.readthedocs.io/en/2.5.0/sections/user_guide/api/config.html\">uwtools.api.config</a> Read the Docs page.</div>\n",
     "\n",
     "## Table of Contents\n",

notebooks/exp-config-cb.ipynb

@@ -7,8 +7,6 @@
    "source": [
     "# Building and Validating an Experiment Configuration\n",
     "\n",
-    "<div class=\"alert alert-warning\"><b>Note: </b>This notebook was tested using <code>uwtools</code> version 2.6.0.</div>\n",
-    "\n",
     "This notebook demonstrates how to build up a configuration file for generating FV3 initial conditions (ICs) from a hierarchy of smaller, purpose-specific files; dereferencing Jinja2 expressions in the configuration; and validating the final configuration to check for potential errors. A larger, more complex experimental setup could be built up by applying similar techniques.\n",
     "<!--cell 0-->"
    ]

notebooks/fs.ipynb

@@ -9,7 +9,6 @@
     "\n",
     "The `uwtools` API's `fs` module provides functions to copy and link files as well as create directories. \n",
     "\n",
-    "<div class=\"alert alert-warning\"><b>Note: </b>This notebook was tested using <code>uwtools</code> version 2.6.0. </div>\n",
     "<div class=\"alert alert-info\">For more information, please see the <a href=\"https://uwtools.readthedocs.io/en/2.5.0/sections/user_guide/api/fs.html\">uwtools.api.fs</a> Read the Docs page.</div>\n",
     "\n",
     "## Table of Contents\n",

notebooks/rocoto.ipynb

@@ -9,7 +9,6 @@
     "\n",
     "The `uwtools` API's `rocoto` module provides functions to build and validate Rocoto workflows. For more information on the UW YAML language than what is discussed here, see the <a href=\"https://uwtools.readthedocs.io/en/main/sections/user_guide/yaml/rocoto.html\">Defining a Rocoto Workflow</a> page. For more on Rocoto XML documents, see the <a href=\"https://noaa-gsl.github.io/rocoto/\">Rocoto Documentation</a>.\n",
     "\n",
-    "<div class=\"alert alert-warning\"><b>Note: </b>This notebook was tested using <code>uwtools</code> version 2.6.0. </div>\n",
     "<div class=\"alert alert-info\">For more information, please see the <a href=\"https://uwtools.readthedocs.io/en/2.5.0/sections/user_guide/api/rocoto.html\">uwtools.api.rocoto</a> Read the Docs page.</div>\n",
     "\n",
     "## Table of Contents\n",

notebooks/template.ipynb

@@ -9,7 +9,6 @@
     "\n",
     "The `uwtools` API's `template` module provides functions to render Jinja2 templates and to translate atparse templates to Jinja2.\n",
     "\n",
-    "<div class=\"alert alert-warning\"><b>Note: </b>This notebook was tested using <code>uwtools</code> version 2.6.0. </div>\n",
     "<div class=\"alert alert-info\">For more information, please see the <a href=\"https://uwtools.readthedocs.io/en/2.5.0/sections/user_guide/api/template.html\">uwtools.api.template</a> Read the Docs page.</div>\n",
     "\n",
     "## Table of Contents\n",