BMGLab
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ComThinkDataSci
ComThinkDataSci PublicThis repo is to manage lecture notes and practice codes for the class "Computational Thinking and Data Science"
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Repositories
- PeakATail Public
Single-cell APA peak calling and poly(A) tail analysis from scRNA-seq. Detects polyadenylation sites, quantifies 3'UTR length switching, and compares APA usage across cell clusters and samples.
- fusarium-oxysporum-six-avr2-lineage Public
Analysis code for: Lineage predicts SIX effector repertoire but not Avr2 race genotype in Fusarium oxysporum isolates from Türkiye
- peakatail-hub Public
- TRclinsafe Public
- fusarium-oxysporum-fsp-audit Public
Per-label and per-deposit audit of 363 public Fusarium oxysporum genomes: forma specialis monophyly, redundancy and mislabelled deposits (Akal & Kaymaz)
- GSNetAct Public
- HistoParser Public
HistoPath is a comprehensive toolkit for extracting quantitative features from histopathology images, performing feature selection, and clustering patient samples based on tissue characteristics. It also integrates with MRI radiomic data.
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