Skip to content

Add an optional argument to HistBase to draw horizontal spine line at threshold. #132

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
Nanguage merged 1 commit into from
Sep 22, 2026
Merged

Add an optional argument to HistBase to draw horizontal spine line at threshold. #132

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 8 additions & 0 deletions coolbox/core/track/hist/base.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -57,6 +57,9 @@ class HistBase(Track, PlotHist):

min_value : {float, 'auto'}, optional
Min value of track. 'auto' for specify max value automatically, default 'auto'.

spine: {float}, optional
Width of a horizon spine draw at the threshold.
"""

STYLE_LINE = "line"
Expand Down Expand Up @@ -122,6 +125,11 @@ def plot(self, ax, gr: GenomeRange, **kwargs):
self.plot_hist(ax, gr, indexes, values)
self.plot_label()

if "spine" in self.properties:
ax.spines['bottom'].set_position(('data', self.properties["threshold"]))
ax.spines['bottom'].set_linewidth(self.properties["spine"])
ax.spines['bottom'].set_visible(True)

def fetch_plot_data(self, gr: GenomeRange, **kwargs) -> HistData:
"""

Expand Down
Loading