Issues

• Filtering Steps for proActiv Analysis

  GoekeLab/proActiv#55 · Filter by author lucianhu opened on Oct 29, 2024
  1

• plotPromoters function not available in latest version

  GoekeLab/proActiv#47 · Filter by author notthathime opened on May 26, 2023
  1

• A little question about internal promoter^_^

  GoekeLab/proActiv#46 · Filter by author CuteGold0407 opened on May 21, 2023

• Error in EstimateSizeFactorsForMatrix: at least one zero

  GoekeLab/proActiv#45 · Filter by author notthathime opened on Apr 28, 2023
  1

• calculatePromoterReadCounts were not running

  GoekeLab/proActiv#44 · Filter by author GuangyaoL opened on Mar 8, 2023
  1

• Identification of cancer-associated promoters

  GoekeLab/proActiv#43 · Filter by author alejandrogzi opened on Nov 5, 2022

• Getting active/inactive and major/minor promoters when no condition is specified

  GoekeLab/proActiv#38 · Filter by author elenichri opened on Mar 28, 2022
  1

  

• DEXSeq hangs

  GoekeLab/proActiv#34 · Filter by author elenichri opened on Oct 27, 2021

• No major promoter when internal promoters are strong

  question
  GoekeLab/proActiv#22 · Filter by author lukauskas opened on Oct 22, 2020
  2

  

• Example of how to generate junction file from fastq

  enhancement
  GoekeLab/proActiv#21 · Filter by author lukauskas opened on Oct 21, 2020
  1

  

• proActiv throws error with xz-compressed Tophat2 junction file

  bug
  GoekeLab/proActiv#17 · Filter by author jleechung opened on Jul 1, 2020

• estimate promoter activity from bam file

  enhancement
  GoekeLab/proActiv#3 · Filter by author jonathangoeke opened on Dec 5, 2019
  2