Scripts for statistics and plotting figures in "NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice", published in Nature Biotechnology 2019.
- /data # metadata, OTU table and taxonomy files
- /fig1-6 # raw data, Rmarkdown scripts and output HTML format results
- figX/figX.Rmd # X is number 1-6, including the reproducable R scripts for each panel in figure
- figX/figX.html # Readability report by R markdown, include annotations, scripts and figures
- script/ # General R scripts used in this study
If you used these scripts, please cited the paper below:
Jingying Zhang#, Yong-Xin Liu#, Na Zhang#, Bin Hu#, Tao Jin#, ..., Chengcai Chu*, Yang Bai*. NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice. 2019. Nature Biotechnology.