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Molecular Phenotypes of Null Alleles in Cells (MorPhiC)

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  1. STAR-suite STAR-suite Public

    C++ 11 2

  2. morphic-bio.github.io morphic-bio.github.io Public

    Basic repository with documentation, useful information and links related to the MorPHiC project

    JavaScript 4

  3. metadata-schema metadata-schema Public

    Repository to hold the MorPhiC metadata schema

    Python 3 1

  4. scRNA-seq scRNA-seq Public

    Python 3

  5. rapidmacs rapidmacs Public

    RapidMACS: MACS3-identical narrow peak calling for ATAC-seq, ChIP-seq and CUT&RUN, 3.5-51x faster. Publication artifact for the Bioinformatics Applications Note.

    C++ 3

  6. Bulk-RNA-seq Bulk-RNA-seq Public

    Python 1

Repositories

Showing 10 of 28 repositories
  • rapidglm Public

    RapidGLM: fast, portable generalized linear models and resampling tests for count data (C++17, MIT), with DESeq2-procedure and SCEPTRE-method applications

    morphic-bio/rapidglm's past year of commit activity
    C++ 0 MIT 0 0 0 Updated Nov 5, 2026
  • exchange-experiment-EOMES Public

    Analyze the results of EOMES KO in exchange experiment

    morphic-bio/exchange-experiment-EOMES's past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 3, 2026
  • STAR-suite Public
    morphic-bio/STAR-suite's past year of commit activity
    C++ 11 MIT 2 0 0 Updated Oct 28, 2026
  • exchange-experiment-analysis Public

    Codes and results for exchange experiment analysis

    morphic-bio/exchange-experiment-analysis's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 26, 2026
  • Chromap-suite Public

    Open-source chromatin-accessibility platform: Chromap + libMACS3 (byte-identical narrow peaks) + libchromap callable library + MCP server. Composes with STAR Suite for end-to-end multiomic (RNA + ATAC) single-binary processing.

    morphic-bio/Chromap-suite's past year of commit activity
    C++ 0 MIT 0 0 0 Updated Oct 19, 2026
  • rapidmacs Public

    RapidMACS: MACS3-identical narrow peak calling for ATAC-seq, ChIP-seq and CUT&RUN, 3.5-51x faster. Publication artifact for the Bioinformatics Applications Note.

    morphic-bio/rapidmacs's past year of commit activity
    C++ 3 MIT 0 1 0 Updated Oct 12, 2026
  • MSK_KO_village_analysis Public

    Analysis and results of MSK KO village data

    morphic-bio/MSK_KO_village_analysis's past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 12, 2026
  • MorPhiC_bulk_RNAseq Public

    workflows for JAX bulk RNAseq data analysis

    morphic-bio/MorPhiC_bulk_RNAseq's past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 9, 2026
  • STAR-suite-paper Public archive

    Moved: the STAR Suite manuscript's benchmark scripts are at morphic-bio/STAR-suite-benchmarks

    morphic-bio/STAR-suite-paper's past year of commit activity
    0 0 0 0 Updated Sep 25, 2026
  • STAR-suite-benchmarks Public

    Benchmark scripts behind the STAR Suite 1.9.5 manuscript (drivers, checkers, concordance analyses)

    morphic-bio/STAR-suite-benchmarks's past year of commit activity
    Shell 0 MIT 0 0 0 Updated Sep 25, 2026

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