fisheries-stock-assessment

FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.

files for r4ss package

State-space, age-structured fish stock assessment model

Stochastic surplus Production model in Continuous Time

FSAdata contains data for use in common fisheries stock analyses. See installation instructions further below.

This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.

Connecting single-stock assessment models through correlated survival

R Shiny application to annotate footage (HD-stills). Originally created for the UWTV surveys carried out by the Marine Institute (Ireland).

Repository containing the files of the JAGGview package, for building the package developed in R.

An age-based state-space stock assessment model for the stock of American plaice on the Grand Bank of Newfoundland.

Bayesian Yield-Per-Recruit Model in Stan

September 2024 (appendix) and Final November SAFE report chapter for eastern Bering Sea pollock

"Principles and applications of fisheries-independent surveys" is a 4-credit course (FISH 572) that delves into the importance of fisheries-independent surveys as a cornerstone for fisheries stock assessment and ecosystem research.

🐟 📈 🌊 a place to manage FIMS' planning process

The DFO Salmon Ontology is a data stewardship and operational process ontology designed to provide a semantic framework for managing, integrating, and stewarding Pacific salmon data across Fisheries and Oceans Canada (DFO).

Punjab Fisheries Department – Project Owner Lead Developer: Mian Salman (CTO, Teqtronis Systems) AI Model: KurmaAI/AQUA-7B | Open AI Framework: Laravel

Code repository for Kapur, M., Adams, G., Lapeylerolie, M., and Thorson, J. AI for Fisheries Science: Neural Network Tools for Forecasting, Spatial Standardization, and Policy Optimization. In review at ICES JMS.

Source code to build my dissertation using bookdown

This repository contains data and computer programs to assess the status of the sea garfish fishery in New South Wales (Australia)

Baseline stock assessment of the butter catfish (Ompok bimaculatus) in Kaptai Lake, Bangladesh, using an integrated length-based approach (LB-SPR and aLBI).