tools_mutect.cwl

Documentation for mutect.cwl

This page is auto-generated. Do not edit.

Overview

Mutect2 (GATK 4)

Docker Requirement

broadinstitute/gatk:4.2.3.0

Inputs

Name	Label	Description	Type	Secondary Files
reference			['string', 'File']	['.fai', '^.dict']
tumor_bam			File	['.bai']
normal_bam			File?	['.bai']
interval_list			File

Outputs

Name	Label	Description	Type	Secondary Files
vcf			File	['.tbi']