Foldseek enables fast and sensitive comparisons of large structure sets.
C 1.3k 163
Compressing protein structures effectively with torsion angles
C++ 198 25
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
C++ 186 17
Multiple Protein Structure Alignment at Scale with FoldMason
C 283 31
Fast indexing and search of discontinuous motifs in protein structures
Rust 221 27
RNA search
C 55 4
Open source code for AlphaFold.
Big Fantastic Virus Database (BFVD): Code used for analyses
An Interactive, Terminal-Native Protein Structure Viewer
Analysis script for foldseek interface
Scripts to benchmark folddisco
scripts and datas related to validation and analysis of Folddisco